Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100596700Uncharacterized protein. (75 aa)    
Predicted Functional Partners:
DEFB1
Defensin beta 1.
     
 0.965
DEFA5
Defensin alpha 5.
     
 0.953
LOC100604016
DEFSN domain-containing protein.
     
 0.938
LOC100595156
DEFENSIN domain-containing protein.
     
 0.935
DEFA4
Defensin alpha 4.
     
 0.925
ENSNLEP00000048177
Defensin_propep domain-containing protein.
     
 0.925
DEFA6
Defensin alpha 6.
     
 0.913
ENSNLEP00000035662
Uncharacterized protein.
  
  
 
0.903
LOC100590398
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.720
G1QHT6_NOMLE
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.607
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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