ARL13B protein (Nomascus leucogenys) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ARL13B

ADP ribosylation factor like GTPase 13B. (428 aa)

Predicted Functional Partners:

INPP5E

0.936

IFT22

0.900

IFT46

0.890

IFT81

0.838

IFT88

0.829

IFT52

0.824

IFT27

0.823

LOC100607937

0.777

ENSNLEP00000033330

0.777

G1R0B6_NOMLE

0.765

Your Current Organism:

Nomascus leucogenys

NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARL13B	ENSNLEP00000033330	ENSNLEP00000002297	ENSNLEP00000033330	ADP ribosylation factor like GTPase 13B.	Uncharacterized protein.	0.777
ARL13B	G1R0B6_NOMLE	ENSNLEP00000002297	ENSNLEP00000006637	ADP ribosylation factor like GTPase 13B.	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	0.765
ARL13B	IFT22	ENSNLEP00000002297	ENSNLEP00000010088	ADP ribosylation factor like GTPase 13B.	Uncharacterized protein.	0.900
ARL13B	IFT27	ENSNLEP00000002297	ENSNLEP00000033260	ADP ribosylation factor like GTPase 13B.	Intraflagellar transport 27.	0.823
ARL13B	IFT46	ENSNLEP00000002297	ENSNLEP00000008988	ADP ribosylation factor like GTPase 13B.	Intraflagellar transport 46.	0.890
ARL13B	IFT52	ENSNLEP00000002297	ENSNLEP00000007984	ADP ribosylation factor like GTPase 13B.	Intraflagellar transport 52.	0.824
ARL13B	IFT81	ENSNLEP00000002297	ENSNLEP00000033418	ADP ribosylation factor like GTPase 13B.	Intraflagellar transport 81.	0.838
ARL13B	IFT88	ENSNLEP00000002297	ENSNLEP00000002109	ADP ribosylation factor like GTPase 13B.	Intraflagellar transport 88.	0.829
ARL13B	INPP5E	ENSNLEP00000002297	ENSNLEP00000010068	ADP ribosylation factor like GTPase 13B.	IPPc domain-containing protein.	0.936
ARL13B	LOC100607937	ENSNLEP00000002297	ENSNLEP00000019820	ADP ribosylation factor like GTPase 13B.	Uncharacterized protein.	0.777
ENSNLEP00000033330	ARL13B	ENSNLEP00000033330	ENSNLEP00000002297	Uncharacterized protein.	ADP ribosylation factor like GTPase 13B.	0.777
ENSNLEP00000033330	IFT22	ENSNLEP00000033330	ENSNLEP00000010088	Uncharacterized protein.	Uncharacterized protein.	0.965
ENSNLEP00000033330	IFT27	ENSNLEP00000033330	ENSNLEP00000033260	Uncharacterized protein.	Intraflagellar transport 27.	0.949
ENSNLEP00000033330	IFT46	ENSNLEP00000033330	ENSNLEP00000008988	Uncharacterized protein.	Intraflagellar transport 46.	0.976
ENSNLEP00000033330	IFT52	ENSNLEP00000033330	ENSNLEP00000007984	Uncharacterized protein.	Intraflagellar transport 52.	0.976
ENSNLEP00000033330	IFT81	ENSNLEP00000033330	ENSNLEP00000033418	Uncharacterized protein.	Intraflagellar transport 81.	0.986
ENSNLEP00000033330	IFT88	ENSNLEP00000033330	ENSNLEP00000002109	Uncharacterized protein.	Intraflagellar transport 88.	0.941
G1R0B6_NOMLE	ARL13B	ENSNLEP00000006637	ENSNLEP00000002297	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	ADP ribosylation factor like GTPase 13B.	0.765
IFT22	ARL13B	ENSNLEP00000010088	ENSNLEP00000002297	Uncharacterized protein.	ADP ribosylation factor like GTPase 13B.	0.900
IFT22	ENSNLEP00000033330	ENSNLEP00000010088	ENSNLEP00000033330	Uncharacterized protein.	Uncharacterized protein.	0.965

page 1 of 4

Server load: medium (74%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About