Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASCL1 | LDB1 | ENSNLEP00000027743 | ENSNLEP00000018227 | Achaete-scute family bHLH transcription factor 1. | LIM domain binding 1. | 0.449 |
ASCL1 | LDB2 | ENSNLEP00000027743 | ENSNLEP00000038527 | Achaete-scute family bHLH transcription factor 1. | LIM domain binding 2. | 0.449 |
ASCL1 | LHX1 | ENSNLEP00000027743 | ENSNLEP00000002818 | Achaete-scute family bHLH transcription factor 1. | LIM homeobox 1. | 0.543 |
ASCL1 | NEUROG2 | ENSNLEP00000027743 | ENSNLEP00000038466 | Achaete-scute family bHLH transcription factor 1. | Neurogenin 2. | 0.812 |
CCNK | LHX1 | ENSNLEP00000000906 | ENSNLEP00000002818 | Cyclin K; Belongs to the cyclin family. | LIM homeobox 1. | 0.717 |
ENSNLEP00000043257 | LDB1 | ENSNLEP00000043257 | ENSNLEP00000018227 | LisH domain-containing protein. | LIM domain binding 1. | 0.850 |
ENSNLEP00000043257 | LDB2 | ENSNLEP00000043257 | ENSNLEP00000038527 | LisH domain-containing protein. | LIM domain binding 2. | 0.583 |
ENSNLEP00000043257 | LHX1 | ENSNLEP00000043257 | ENSNLEP00000002818 | LisH domain-containing protein. | LIM homeobox 1. | 0.757 |
ENSNLEP00000043257 | SSBP3 | ENSNLEP00000043257 | ENSNLEP00000004015 | LisH domain-containing protein. | Single stranded DNA binding protein 3. | 0.764 |
EVX1 | LHX1 | ENSNLEP00000018235 | ENSNLEP00000002818 | Even-skipped homeobox 1. | LIM homeobox 1. | 0.562 |
LDB1 | ASCL1 | ENSNLEP00000018227 | ENSNLEP00000027743 | LIM domain binding 1. | Achaete-scute family bHLH transcription factor 1. | 0.449 |
LDB1 | ENSNLEP00000043257 | ENSNLEP00000018227 | ENSNLEP00000043257 | LIM domain binding 1. | LisH domain-containing protein. | 0.850 |
LDB1 | LHX1 | ENSNLEP00000018227 | ENSNLEP00000002818 | LIM domain binding 1. | LIM homeobox 1. | 0.803 |
LDB1 | NEUROG2 | ENSNLEP00000018227 | ENSNLEP00000038466 | LIM domain binding 1. | Neurogenin 2. | 0.597 |
LDB1 | SSBP3 | ENSNLEP00000018227 | ENSNLEP00000004015 | LIM domain binding 1. | Single stranded DNA binding protein 3. | 0.943 |
LDB1 | SSBP4 | ENSNLEP00000018227 | ENSNLEP00000043424 | LIM domain binding 1. | LisH domain-containing protein. | 0.850 |
LDB2 | ASCL1 | ENSNLEP00000038527 | ENSNLEP00000027743 | LIM domain binding 2. | Achaete-scute family bHLH transcription factor 1. | 0.449 |
LDB2 | ENSNLEP00000043257 | ENSNLEP00000038527 | ENSNLEP00000043257 | LIM domain binding 2. | LisH domain-containing protein. | 0.583 |
LDB2 | LHX1 | ENSNLEP00000038527 | ENSNLEP00000002818 | LIM domain binding 2. | LIM homeobox 1. | 0.768 |
LDB2 | PAX2 | ENSNLEP00000038527 | ENSNLEP00000017976 | LIM domain binding 2. | Paired domain-containing protein. | 0.461 |
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