Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COP1 | CUL4A | ENSNLEP00000018741 | ENSNLEP00000000861 | COP1 E3 ubiquitin ligase. | Cullin 4A; Belongs to the cullin family. | 0.955 |
COP1 | CUL4B | ENSNLEP00000018741 | ENSNLEP00000042782 | COP1 E3 ubiquitin ligase. | Cullin 4B; Belongs to the cullin family. | 0.826 |
COP1 | DDB1 | ENSNLEP00000018741 | ENSNLEP00000002855 | COP1 E3 ubiquitin ligase. | Damage specific DNA binding protein 1. | 0.979 |
COP1 | ERCC8 | ENSNLEP00000018741 | ENSNLEP00000003414 | COP1 E3 ubiquitin ligase. | ERCC excision repair 8, CSA ubiquitin ligase complex subunit. | 0.956 |
COP1 | RBX1 | ENSNLEP00000018741 | ENSNLEP00000036078 | COP1 E3 ubiquitin ligase. | Ring-box 1. | 0.916 |
CUL4A | COP1 | ENSNLEP00000000861 | ENSNLEP00000018741 | Cullin 4A; Belongs to the cullin family. | COP1 E3 ubiquitin ligase. | 0.955 |
CUL4A | CUL4B | ENSNLEP00000000861 | ENSNLEP00000042782 | Cullin 4A; Belongs to the cullin family. | Cullin 4B; Belongs to the cullin family. | 0.996 |
CUL4A | DDB1 | ENSNLEP00000000861 | ENSNLEP00000002855 | Cullin 4A; Belongs to the cullin family. | Damage specific DNA binding protein 1. | 0.999 |
CUL4A | ERCC6 | ENSNLEP00000000861 | ENSNLEP00000019209 | Cullin 4A; Belongs to the cullin family. | ERCC excision repair 6, chromatin remodeling factor. | 0.948 |
CUL4A | ERCC8 | ENSNLEP00000000861 | ENSNLEP00000003414 | Cullin 4A; Belongs to the cullin family. | ERCC excision repair 8, CSA ubiquitin ligase complex subunit. | 0.989 |
CUL4A | POLR2A | ENSNLEP00000000861 | ENSNLEP00000011555 | Cullin 4A; Belongs to the cullin family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.903 |
CUL4A | POLR2I | ENSNLEP00000000861 | ENSNLEP00000014230 | Cullin 4A; Belongs to the cullin family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.899 |
CUL4A | RBX1 | ENSNLEP00000000861 | ENSNLEP00000036078 | Cullin 4A; Belongs to the cullin family. | Ring-box 1. | 0.998 |
CUL4A | UVSSA | ENSNLEP00000000861 | ENSNLEP00000001281 | Cullin 4A; Belongs to the cullin family. | UV stimulated scaffold protein A. | 0.841 |
CUL4A | WDR61 | ENSNLEP00000000861 | ENSNLEP00000039414 | Cullin 4A; Belongs to the cullin family. | WD repeat domain 61. | 0.912 |
CUL4B | COP1 | ENSNLEP00000042782 | ENSNLEP00000018741 | Cullin 4B; Belongs to the cullin family. | COP1 E3 ubiquitin ligase. | 0.826 |
CUL4B | CUL4A | ENSNLEP00000042782 | ENSNLEP00000000861 | Cullin 4B; Belongs to the cullin family. | Cullin 4A; Belongs to the cullin family. | 0.996 |
CUL4B | DDB1 | ENSNLEP00000042782 | ENSNLEP00000002855 | Cullin 4B; Belongs to the cullin family. | Damage specific DNA binding protein 1. | 0.999 |
CUL4B | ERCC6 | ENSNLEP00000042782 | ENSNLEP00000019209 | Cullin 4B; Belongs to the cullin family. | ERCC excision repair 6, chromatin remodeling factor. | 0.790 |
CUL4B | ERCC8 | ENSNLEP00000042782 | ENSNLEP00000003414 | Cullin 4B; Belongs to the cullin family. | ERCC excision repair 8, CSA ubiquitin ligase complex subunit. | 0.949 |
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