Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MRPS18A | RBMS3 | ENSNLEP00000004707 | ENSNLEP00000005021 | Mitochondrial ribosomal protein S18A. | RNA binding motif single stranded interacting protein 3. | 0.422 |
MYC | RBMS3 | ENSNLEP00000006740 | ENSNLEP00000005021 | Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. | RNA binding motif single stranded interacting protein 3. | 0.504 |
NGRN | RBMS3 | ENSNLEP00000014580 | ENSNLEP00000005021 | Neugrin, neurite outgrowth associated. | RNA binding motif single stranded interacting protein 3. | 0.424 |
RBMS3 | MRPS18A | ENSNLEP00000005021 | ENSNLEP00000004707 | RNA binding motif single stranded interacting protein 3. | Mitochondrial ribosomal protein S18A. | 0.422 |
RBMS3 | MYC | ENSNLEP00000005021 | ENSNLEP00000006740 | RNA binding motif single stranded interacting protein 3. | Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. | 0.504 |
RBMS3 | NGRN | ENSNLEP00000005021 | ENSNLEP00000014580 | RNA binding motif single stranded interacting protein 3. | Neugrin, neurite outgrowth associated. | 0.424 |
RBMS3 | TLCD5 | ENSNLEP00000005021 | ENSNLEP00000009027 | RNA binding motif single stranded interacting protein 3. | TLC domain containing 5. | 0.456 |
TLCD5 | RBMS3 | ENSNLEP00000009027 | ENSNLEP00000005021 | TLC domain containing 5. | RNA binding motif single stranded interacting protein 3. | 0.456 |