STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC47Coiled-coil domain containing 47. (483 aa)    
Predicted Functional Partners:
TMCO1
Transmembrane and coiled-coil domains 1.
    
 
 0.930
NCLN
Nicalin.
    
 
 0.916
TMEM147
Transmembrane protein 147.
    
 
 0.907
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 
 0.907
SEC61G
SEC61 translocon gamma subunit.
    
   0.850
RPL31
Uncharacterized protein.
   
   0.810
WDR83OS
WD repeat domain 83 opposite strand.
    
 0.808
RPL11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
   0.785
RPL30
Ribosomal_L7Ae domain-containing protein.
   
   0.780
ENSNLEP00000031722
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
   0.776
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.