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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYDE1Synapse defective Rho GTPase homolog 1. (687 aa)    
Predicted Functional Partners:
RHOB
Ras homolog family member B.
    
 0.623
CNTROB
Centrobin, centriole duplication and spindle assembly protein.
    
 
 0.615
POLR2D
RNA polymerase II subunit D.
    
   0.608
RHOG
Ras homolog family member G.
    
 0.591
GEN1
GEN1 Holliday junction 5' flap endonuclease.
      
 0.584
PACSIN1
Protein kinase C and casein kinase substrate in neurons 1.
      
 0.580
CBR3
Carbonyl reductase 3; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.555
RHOA
Ras homolog family member A.
    
 0.539
RHOF
Ras homolog family member F, filopodia associated.
    
 0.487
XPO1
Exportin 1.
      
 0.485
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.