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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STRCStereocilin. (1691 aa)    
Predicted Functional Partners:
TSPEAR
Thrombospondin type laminin G domain and EAR repeats.
    
 0.479
SKAP1
Src kinase associated phosphoprotein 1.
    
 
 0.458
FIG4
FIG4 phosphoinositide 5-phosphatase.
    
 
 0.458
AFF3
AF4/FMR2 family member 3.
   
 0.430
TSNARE1
t-SNARE coiled-coil homology domain-containing protein.
    
 0.428
STAU1
Staufen double-stranded RNA binding protein 1.
    
 
 0.423
ESPNL
Espin like.
   
 0.407
ENSNLEP00000030526
Uncharacterized protein.
   
 0.407
PCCB
Propionyl-CoA carboxylase subunit beta.
      
 0.407
CLRN2
Clarin 2.
      
 0.402
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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