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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP38Ubiquitin specific peptidase 38; Belongs to the peptidase C19 family. (1042 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48.
   
 0.808
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 
 0.709
DMWD
DM1 locus, WD repeat containing.
   
 0.708
WDR20
WD repeat domain 20.
   
 0.708
HHIP
Hedgehog interacting protein.
      
 0.700
INPP4B
Inositol polyphosphate-4-phosphatase type II B.
      
 0.699
FREM3
FRAS1 related extracellular matrix 3.
      
 0.683
ENSNLEP00000034619
Ubiquitin-like domain-containing protein.
    
 0.680
ENSNLEP00000035742
ABC transporter domain-containing protein.
      
 0.676
ENSNLEP00000025767
Uncharacterized protein.
    
 0.675
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.