STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFD1Ubiquitin recognition factor in ER associated degradation 1. (312 aa)    
Predicted Functional Partners:
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 0.999
UBXN7
UBX domain-containing protein 7.
   
 0.995
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
    
 0.988
FAF1
Fas associated factor 1.
    
 0.972
FAF2
Fas associated factor family member 2.
    
 0.970
VCPIP1
Valosin containing protein interacting protein 1.
    
 
 0.944
UBAC2
UBA domain containing 2.
    
 
 0.907
UBXN10
UBX domain protein 10.
    
 
 0.907
NSFL1C
NSFL1 cofactor.
   
 
 0.904
ENSNLEP00000047513
UBX domain-containing protein.
   
 
 0.904
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.