Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACD | POT1 | ENSNLEP00000046043 | ENSNLEP00000032687 | Uncharacterized protein. | Protection of telomeres 1. | 0.999 |
ACD | TERF2 | ENSNLEP00000046043 | ENSNLEP00000006668 | Uncharacterized protein. | Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. | 0.994 |
ACD | TERF2IP | ENSNLEP00000046043 | ENSNLEP00000015880 | Uncharacterized protein. | Rap1_C domain-containing protein. | 0.995 |
ACD | TINF2 | ENSNLEP00000046043 | ENSNLEP00000018665 | Uncharacterized protein. | TERF1 interacting nuclear factor 2. | 0.999 |
BRCA1 | DCLRE1B | ENSNLEP00000042201 | ENSNLEP00000043458 | BRCA1 DNA repair associated. | DNA cross-link repair 1B. | 0.481 |
BRCA1 | MRE11 | ENSNLEP00000042201 | ENSNLEP00000030208 | BRCA1 DNA repair associated. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.998 |
BRCA1 | NBN | ENSNLEP00000042201 | ENSNLEP00000029664 | BRCA1 DNA repair associated. | Nibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. | 0.983 |
BRCA1 | POT1 | ENSNLEP00000042201 | ENSNLEP00000032687 | BRCA1 DNA repair associated. | Protection of telomeres 1. | 0.617 |
BRCA1 | SLX4 | ENSNLEP00000042201 | ENSNLEP00000011796 | BRCA1 DNA repair associated. | SLX4 structure-specific endonuclease subunit. | 0.795 |
BRCA1 | TERF2 | ENSNLEP00000042201 | ENSNLEP00000006668 | BRCA1 DNA repair associated. | Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. | 0.859 |
BRCA1 | TERF2IP | ENSNLEP00000042201 | ENSNLEP00000015880 | BRCA1 DNA repair associated. | Rap1_C domain-containing protein. | 0.634 |
BRCA1 | TINF2 | ENSNLEP00000042201 | ENSNLEP00000018665 | BRCA1 DNA repair associated. | TERF1 interacting nuclear factor 2. | 0.657 |
DCLRE1B | BRCA1 | ENSNLEP00000043458 | ENSNLEP00000042201 | DNA cross-link repair 1B. | BRCA1 DNA repair associated. | 0.481 |
DCLRE1B | MRE11 | ENSNLEP00000043458 | ENSNLEP00000030208 | DNA cross-link repair 1B. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.558 |
DCLRE1B | NBN | ENSNLEP00000043458 | ENSNLEP00000029664 | DNA cross-link repair 1B. | Nibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. | 0.576 |
DCLRE1B | POT1 | ENSNLEP00000043458 | ENSNLEP00000032687 | DNA cross-link repair 1B. | Protection of telomeres 1. | 0.750 |
DCLRE1B | SLX4 | ENSNLEP00000043458 | ENSNLEP00000011796 | DNA cross-link repair 1B. | SLX4 structure-specific endonuclease subunit. | 0.827 |
DCLRE1B | TERF2 | ENSNLEP00000043458 | ENSNLEP00000006668 | DNA cross-link repair 1B. | Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. | 0.982 |
DCLRE1B | TERF2IP | ENSNLEP00000043458 | ENSNLEP00000015880 | DNA cross-link repair 1B. | Rap1_C domain-containing protein. | 0.865 |
DCLRE1B | TINF2 | ENSNLEP00000043458 | ENSNLEP00000018665 | DNA cross-link repair 1B. | TERF1 interacting nuclear factor 2. | 0.775 |
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