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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA16Spermatogenesis associated 16. (529 aa)    
Predicted Functional Partners:
FAM71D
Family with sequence similarity 71 member D.
      
 0.803
MAGEB16
MAGE family member B16.
   
  
 0.787
TULP2
Uncharacterized protein; Belongs to the TUB family.
      
 0.786
ZFAND4
Zinc finger AN1-type containing 4.
      
 0.783
RNF17
Ring finger protein 17.
   
  
 0.782
WBP2NL
WBP2 N-terminal like.
      
 0.779
SLC9B1
Solute carrier family 9 member B1.
   
  
 0.775
C9orf43
Chromosome 9 open reading frame 43.
      
 0.766
DMRT1
Doublesex and mab-3 related transcription factor 1.
      
 0.742
TMCO5A
Transmembrane and coiled-coil domains 5A.
      
 0.727
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.