STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL5A2Collagen type V alpha 2 chain. (1499 aa)    
Predicted Functional Partners:
COL3A1
Collagen type III alpha 1 chain.
  
 
0.983
COL1A2
Collagen type I alpha 2 chain.
  
0.980
COL1A1
Collagen type I alpha 1 chain.
  
 
0.942
ENSNLEP00000044084
Fibrillar collagen NC1 domain-containing protein.
  
0.925
FBN1
Fibrillin 1.
   
 0.896
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.853
LUM
Lumican.
   
 0.843
DOK6
Docking protein 6.
      
 0.840
DOK4
Docking protein 4.
      
 0.839
EFR3A
EFR3 homolog A.
      
 0.839
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.