close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTP4Receptor transporter protein 4. (246 aa)    
Predicted Functional Partners:
RSAD2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.874
USP41
USP domain-containing protein; Belongs to the peptidase C19 family.
   
  
 0.867
OAS2
2'-5'-oligoadenylate synthetase 2.
   
  
 0.838
OAS1
2'-5'-oligoadenylate synthetase 1.
   
  
 0.834
IFI35
Interferon induced protein 35.
   
  
 0.803
IRF7
Interferon regulatory factor 7.
   
  
 0.734
RNF213
RING-type domain-containing protein.
   
  
 0.734
PARP9
Poly(ADP-ribose) polymerase family member 9.
   
  
 0.700
IRF9
Interferon regulatory factor 9.
   
  
 0.694
IFIH1
Interferon induced with helicase C domain 1.
   
  
 0.659
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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