Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B2M | CALR | ENSNLEP00000037660 | ENSNLEP00000015731 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | Calreticulin. | 0.840 |
B2M | PDIA3 | ENSNLEP00000037660 | ENSNLEP00000006562 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | Protein disulfide-isomerase. | 0.849 |
B2M | PSMB8 | ENSNLEP00000037660 | ENSNLEP00000008201 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | Proteasome subunit beta. | 0.449 |
B2M | TAP1 | ENSNLEP00000037660 | ENSNLEP00000008224 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | Transporter 1, ATP binding cassette subfamily B member. | 0.642 |
B2M | TAP2 | ENSNLEP00000037660 | ENSNLEP00000047037 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | Transporter 2, ATP binding cassette subfamily B member. | 0.599 |
B2M | TAPBP | ENSNLEP00000037660 | ENSNLEP00000008343 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | TAP binding protein. | 0.787 |
CALR | B2M | ENSNLEP00000015731 | ENSNLEP00000037660 | Calreticulin. | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | 0.840 |
CALR | PDIA3 | ENSNLEP00000015731 | ENSNLEP00000006562 | Calreticulin. | Protein disulfide-isomerase. | 0.999 |
CALR | TAP1 | ENSNLEP00000015731 | ENSNLEP00000008224 | Calreticulin. | Transporter 1, ATP binding cassette subfamily B member. | 0.958 |
CALR | TAP2 | ENSNLEP00000015731 | ENSNLEP00000047037 | Calreticulin. | Transporter 2, ATP binding cassette subfamily B member. | 0.952 |
CALR | TAPBP | ENSNLEP00000015731 | ENSNLEP00000008343 | Calreticulin. | TAP binding protein. | 0.999 |
GBP1 | IRF1 | ENSNLEP00000012481 | ENSNLEP00000015443 | Guanylate binding protein 1. | Interferon regulatory factor. | 0.633 |
GBP1 | PSMB9 | ENSNLEP00000012481 | ENSNLEP00000008235 | Guanylate binding protein 1. | Proteasome subunit beta. | 0.514 |
GBP1 | STAT1 | ENSNLEP00000012481 | ENSNLEP00000034193 | Guanylate binding protein 1. | Signal transducer and activator of transcription. | 0.919 |
GBP1 | TAP1 | ENSNLEP00000012481 | ENSNLEP00000008224 | Guanylate binding protein 1. | Transporter 1, ATP binding cassette subfamily B member. | 0.714 |
IRF1 | GBP1 | ENSNLEP00000015443 | ENSNLEP00000012481 | Interferon regulatory factor. | Guanylate binding protein 1. | 0.633 |
IRF1 | PSMB8 | ENSNLEP00000015443 | ENSNLEP00000008201 | Interferon regulatory factor. | Proteasome subunit beta. | 0.611 |
IRF1 | PSMB9 | ENSNLEP00000015443 | ENSNLEP00000008235 | Interferon regulatory factor. | Proteasome subunit beta. | 0.747 |
IRF1 | STAT1 | ENSNLEP00000015443 | ENSNLEP00000034193 | Interferon regulatory factor. | Signal transducer and activator of transcription. | 0.990 |
IRF1 | TAP1 | ENSNLEP00000015443 | ENSNLEP00000008224 | Interferon regulatory factor. | Transporter 1, ATP binding cassette subfamily B member. | 0.778 |
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