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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAT3FAT atypical cadherin 3. (4557 aa)    
Predicted Functional Partners:
FJX1
Four-jointed box kinase 1.
   
 
 0.724
MTNR1B
Uncharacterized protein.
      
 0.641
LIX1
Limb and CNS expressed 1.
   
 0.635
LIX1L
Limb and CNS expressed 1 like.
   
 0.635
MTNR1A
Melatonin receptor 1A; Belongs to the G-protein coupled receptor 1 family.
      
 0.604
CTNNB1
Catenin beta 1.
    
 0.579
RERE
Arginine-glutamic acid dipeptide repeats.
    
 0.567
ATN1
Atrophin 1.
    
 0.567
CSMD3
CUB and Sushi multiple domains 3.
    
 0.517
LAMC1
Laminin subunit gamma 1.
      
 0.471
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.