Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FIP1L1Factor interacting with PAPOLA and CPSF1. (594 aa)    
Predicted Functional Partners:
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.999
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.999
WDR33
WD repeat domain 33.
   
 0.999
CPSF4
Cleavage and polyadenylation specific factor 4.
    
 0.997
CPSF1
CPSF_A domain-containing protein.
   
 0.993
SYMPK
Symplekin.
   
 0.988
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.985
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.981
CPSF4L
Cleavage and polyadenylation specific factor 4 like.
    
 0.979
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 0.977
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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