Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHRF1PHD and ring finger domains 1. (1649 aa)    
Predicted Functional Partners:
CSNK2A2
Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.
   
   0.751
SMG5
SMG5 nonsense mediated mRNA decay factor.
   
    0.590
JMJD6
JmjC domain-containing protein.
    
 
 0.558
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 
 0.555
POLR2G
S1 domain-containing protein.
    
   0.542
TAOK3
TAO kinase 3.
   
  
 0.534
SPPL3
Signal peptide peptidase like 3.
      
 0.531
CSNK2A1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
   0.530
GTF3C1
General transcription factor IIIC subunit 1.
   
  
 0.530
PXK
PX domain containing serine/threonine kinase like.
      
 0.526
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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