STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNLEP00000041863SMG1_N domain-containing protein. (611 aa)    
Predicted Functional Partners:
SMG1
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
 
     0.937
SMG9
SMG9 nonsense mediated mRNA decay factor.
    
 0.906
SMG8
SMG8 nonsense mediated mRNA decay factor.
   
 0.906
SMG7
SMG7 nonsense mediated mRNA decay factor.
   
 0.881
RICTOR
RPTOR independent companion of MTOR complex 2.
   
 0.879
RPTOR
Regulatory associated protein of MTOR complex 1.
   
 0.879
MLST8
MTOR associated protein, LST8 homolog.
    
 0.869
MAPKAP1
MAPK associated protein 1.
    
 0.869
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
   
 
 0.826
UPF1
UPF1 RNA helicase and ATPase.
   
 
 0.814
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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