Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGRN | PRSS12 | ENSNLEP00000034871 | ENSNLEP00000010821 | Agrin. | Neurotrypsin; Plays a role in neuronal plasticity and the proteolytic action may subserve structural reorganizations associated with learning and memory operations; Belongs to the peptidase S1 family. | 0.558 |
CHRNB3 | MGAT5 | ENSNLEP00000015693 | ENSNLEP00000010202 | Cholinergic receptor nicotinic beta 3 subunit. | Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase. | 0.568 |
CHRNB3 | PRSS12 | ENSNLEP00000015693 | ENSNLEP00000010821 | Cholinergic receptor nicotinic beta 3 subunit. | Neurotrypsin; Plays a role in neuronal plasticity and the proteolytic action may subserve structural reorganizations associated with learning and memory operations; Belongs to the peptidase S1 family. | 0.577 |
CHRNB3 | SCN4B | ENSNLEP00000015693 | ENSNLEP00000008971 | Cholinergic receptor nicotinic beta 3 subunit. | Sodium voltage-gated channel beta subunit 4. | 0.614 |
CHRNB3 | SYT2 | ENSNLEP00000015693 | ENSNLEP00000047547 | Cholinergic receptor nicotinic beta 3 subunit. | Synaptotagmin 2. | 0.513 |
CRBN | PRSS12 | ENSNLEP00000033380 | ENSNLEP00000010821 | Cereblon. | Neurotrypsin; Plays a role in neuronal plasticity and the proteolytic action may subserve structural reorganizations associated with learning and memory operations; Belongs to the peptidase S1 family. | 0.667 |
EPHB2 | L1CAM | ENSNLEP00000042098 | ENSNLEP00000016553 | EPH receptor B2. | L1 cell adhesion molecule. | 0.939 |
EPHB2 | NRG1 | ENSNLEP00000042098 | ENSNLEP00000045791 | EPH receptor B2. | Neuregulin 1. | 0.536 |
EPHB2 | PRSS12 | ENSNLEP00000042098 | ENSNLEP00000010821 | EPH receptor B2. | Neurotrypsin; Plays a role in neuronal plasticity and the proteolytic action may subserve structural reorganizations associated with learning and memory operations; Belongs to the peptidase S1 family. | 0.648 |
EPHB2 | SPINK9 | ENSNLEP00000042098 | ENSNLEP00000036357 | EPH receptor B2. | Kazal-like domain-containing protein. | 0.461 |
L1CAM | EPHB2 | ENSNLEP00000016553 | ENSNLEP00000042098 | L1 cell adhesion molecule. | EPH receptor B2. | 0.939 |
L1CAM | NRG1 | ENSNLEP00000016553 | ENSNLEP00000045791 | L1 cell adhesion molecule. | Neuregulin 1. | 0.498 |
L1CAM | PRSS12 | ENSNLEP00000016553 | ENSNLEP00000010821 | L1 cell adhesion molecule. | Neurotrypsin; Plays a role in neuronal plasticity and the proteolytic action may subserve structural reorganizations associated with learning and memory operations; Belongs to the peptidase S1 family. | 0.595 |
L1CAM | SPINK9 | ENSNLEP00000016553 | ENSNLEP00000036357 | L1 cell adhesion molecule. | Kazal-like domain-containing protein. | 0.457 |
MGAT5 | CHRNB3 | ENSNLEP00000010202 | ENSNLEP00000015693 | Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase. | Cholinergic receptor nicotinic beta 3 subunit. | 0.568 |
MGAT5 | PRSS12 | ENSNLEP00000010202 | ENSNLEP00000010821 | Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase. | Neurotrypsin; Plays a role in neuronal plasticity and the proteolytic action may subserve structural reorganizations associated with learning and memory operations; Belongs to the peptidase S1 family. | 0.598 |
MGAT5 | SCN4B | ENSNLEP00000010202 | ENSNLEP00000008971 | Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase. | Sodium voltage-gated channel beta subunit 4. | 0.622 |
MGAT5 | SYT2 | ENSNLEP00000010202 | ENSNLEP00000047547 | Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase. | Synaptotagmin 2. | 0.538 |
NRG1 | EPHB2 | ENSNLEP00000045791 | ENSNLEP00000042098 | Neuregulin 1. | EPH receptor B2. | 0.536 |
NRG1 | L1CAM | ENSNLEP00000045791 | ENSNLEP00000016553 | Neuregulin 1. | L1 cell adhesion molecule. | 0.498 |
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