STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA5Spermatogenesis associated 5. (879 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 0.989
DERL1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
 0.895
YOD1
YOD1 deubiquitinase.
   
 0.883
CINP
Cyclin dependent kinase 2 interacting protein.
   
 0.879
UBXN1
UBX domain protein 1.
   
 0.862
UBE4B
Ubiquitination factor E4B.
  
 
 0.861
ENSNLEP00000034619
Ubiquitin-like domain-containing protein.
   
 0.857
SPATA5L1
AAA domain-containing protein.
  
 
 
0.838
PSMB2
Proteasome subunit beta.
   
 0.831
FAAP100
FA core complex associated protein 100.
   
 0.830
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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