STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GANGigaxonin. (597 aa)    
Predicted Functional Partners:
VIM
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 
 0.891
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.867
INA
Internexin neuronal intermediate filament protein alpha; Belongs to the intermediate filament family.
    
 
 0.840
NEFM
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 
 0.831
TBCB
Tubulin folding cofactor B.
    
 
 0.828
DES
Desmin; Belongs to the intermediate filament family.
    
 
 0.727
COMMD9
COMM domain containing 9.
     
  0.693
COMMD5
COMM domain containing 5.
     
  0.693
SDC1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 
 0.693
MAP1B
Microtubule associated protein 1B.
    
 
 0.681
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.