Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BRAT1BRCA1 associated ATM activator 1. (821 aa)    
Predicted Functional Partners:
BRCA1
BRCA1 DNA repair associated.
    
 
 0.776
INTS9
Integrator complex subunit 9.
    
 
 0.763
INTS11
Integrator complex subunit 11.
    
 
 0.729
WDR73
WD repeat domain 73.
    
 
 0.606
INTS4
Integrator complex subunit 4.
    
 
 0.558
TTC7A
Uncharacterized protein.
      
 0.551
TONSL
Tonsoku like, DNA repair protein.
      
 0.534
BRAP
BRCA1 associated protein.
      
 0.521
INCA1
Inhibitor of CDK, cyclin A1 interacting protein 1.
      
 0.512
GNPAT
Dihydroxyacetone phosphate acyltransferase.
      
 0.511
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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