Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B2M | RBM43 | ENSNLEP00000037660 | ENSNLEP00000013211 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | RNA binding motif protein 43. | 0.410 |
ENSNLEP00000036571 | RBM43 | ENSNLEP00000036571 | ENSNLEP00000013211 | RPA_C domain-containing protein. | RNA binding motif protein 43. | 0.410 |
ENSNLEP00000046382 | RBM43 | ENSNLEP00000046382 | ENSNLEP00000013211 | RPA_C domain-containing protein. | RNA binding motif protein 43. | 0.410 |
KPNB1 | RBM43 | ENSNLEP00000001948 | ENSNLEP00000013211 | Karyopherin subunit beta 1. | RNA binding motif protein 43. | 0.412 |
PARP9 | RBM43 | ENSNLEP00000000370 | ENSNLEP00000013211 | Poly(ADP-ribose) polymerase family member 9. | RNA binding motif protein 43. | 0.496 |
RBM43 | B2M | ENSNLEP00000013211 | ENSNLEP00000037660 | RNA binding motif protein 43. | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | 0.410 |
RBM43 | ENSNLEP00000036571 | ENSNLEP00000013211 | ENSNLEP00000036571 | RNA binding motif protein 43. | RPA_C domain-containing protein. | 0.410 |
RBM43 | ENSNLEP00000046382 | ENSNLEP00000013211 | ENSNLEP00000046382 | RNA binding motif protein 43. | RPA_C domain-containing protein. | 0.410 |
RBM43 | KPNB1 | ENSNLEP00000013211 | ENSNLEP00000001948 | RNA binding motif protein 43. | Karyopherin subunit beta 1. | 0.412 |
RBM43 | PARP9 | ENSNLEP00000013211 | ENSNLEP00000000370 | RNA binding motif protein 43. | Poly(ADP-ribose) polymerase family member 9. | 0.496 |
RBM43 | RND3 | ENSNLEP00000013211 | ENSNLEP00000013202 | RNA binding motif protein 43. | Rho family GTPase 3. | 0.539 |
RBM43 | RPA2 | ENSNLEP00000013211 | ENSNLEP00000011805 | RNA binding motif protein 43. | Replication protein A2. | 0.410 |
RBM43 | SASS6 | ENSNLEP00000013211 | ENSNLEP00000014265 | RNA binding motif protein 43. | SAS-6 centriolar assembly protein. | 0.410 |
RBM43 | STN1 | ENSNLEP00000013211 | ENSNLEP00000018551 | RNA binding motif protein 43. | CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. | 0.410 |
RND3 | RBM43 | ENSNLEP00000013202 | ENSNLEP00000013211 | Rho family GTPase 3. | RNA binding motif protein 43. | 0.539 |
RPA2 | RBM43 | ENSNLEP00000011805 | ENSNLEP00000013211 | Replication protein A2. | RNA binding motif protein 43. | 0.410 |
SASS6 | RBM43 | ENSNLEP00000014265 | ENSNLEP00000013211 | SAS-6 centriolar assembly protein. | RNA binding motif protein 43. | 0.410 |
STN1 | RBM43 | ENSNLEP00000018551 | ENSNLEP00000013211 | CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. | RNA binding motif protein 43. | 0.410 |