STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM6SF1Transmembrane 6 superfamily member 1. (370 aa)    
Predicted Functional Partners:
HAPLN4
Hyaluronan and proteoglycan link protein 4.
 
    
 0.738
TRIM58
Tripartite motif containing 58.
      
 0.623
TLX3
T cell leukemia homeobox 3.
      
 0.546
AJAP1
Adherens junctions associated protein 1.
      
 0.457
RASGRF2
Ras protein specific guanine nucleotide releasing factor 2.
      
 0.448
TMEM182
Transmembrane protein 182.
      
 0.448
TMEFF2
Transmembrane protein with EGF like and two follistatin like domains 2.
      
 0.446
ENSNLEP00000038248
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.419
TSPAN33
Tetraspanin.
      
 0.412
SMPD3
Sphingomyelin phosphodiesterase 3.
      
 0.408
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.