STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAP1LC3BUncharacterized protein. (125 aa)    
Predicted Functional Partners:
NBR1
NBR1 autophagy cargo receptor.
   
 0.982
SQSTM1
UBA_5 domain-containing protein.
   
 0.963
ATG4B
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
   
 0.961
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
  
 
0.944
MAP1LC3C
Microtubule associated protein 1 light chain 3 gamma.
  
  
 
0.935
OPTN
Optineurin.
   
 
 0.925
FYCO1
FYVE and coiled-coil domain containing 1.
   
 
 0.923
FUNDC1
FUN14 domain containing 1.
    
 0.920
ENSNLEP00000029139
Uncharacterized protein.
    
 0.920
ATG7
Autophagy related 7.
   
 0.916
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.