STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF6Membrane associated ring-CH-type finger 6. (937 aa)    
Predicted Functional Partners:
UBE2G2
Ubiquitin conjugating enzyme E2 G2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.898
CNOT2
CCR4-NOT transcription complex subunit 2.
   
 
 0.821
SYVN1
Synoviolin 1.
    
 
 0.818
AMFR
Autocrine motility factor receptor.
    
 
 0.817
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
    
 
 0.780
UBE2J2
Ubiquitin conjugating enzyme E2 J2.
    
 
 0.758
STARD7
StAR related lipid transfer domain containing 7.
   
  
 0.714
SAMD12
Sterile alpha motif domain containing 12.
      
 0.700
RAPGEF2
Rap guanine nucleotide exchange factor 2.
      
 0.695
SQLE
Squalene epoxidase.
    
 
 0.693
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.