Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YBX1Y-box binding protein 1. (324 aa)    
Predicted Functional Partners:
YBX3
Y-box binding protein 3.
   
   0.942
DHX9
DExH-box helicase 9.
   
 0.900
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.854
ENSNLEP00000047907
Uncharacterized protein.
   
   0.853
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.851
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.846
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
   
 0.837
LOC100607337
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
   0.827
HNRNPAB
RRM domain-containing protein.
   
 0.813
ENSNLEP00000024848
RRM domain-containing protein.
   
 0.813
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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