Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARR3 | GNAT1 | ENSNLEP00000043372 | ENSNLEP00000008477 | Arrestin 3. | G protein subunit alpha transducin 1. | 0.505 |
ARR3 | GNAT2 | ENSNLEP00000043372 | ENSNLEP00000003647 | Arrestin 3. | G protein subunit alpha transducin 2. | 0.534 |
ARR3 | GNGT1 | ENSNLEP00000043372 | ENSNLEP00000018729 | Arrestin 3. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.612 |
ARR3 | GNGT2 | ENSNLEP00000043372 | ENSNLEP00000003554 | Arrestin 3. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.610 |
ARR3 | OPN1MW | ENSNLEP00000043372 | ENSNLEP00000016747 | Arrestin 3. | G_PROTEIN_RECEP_F1_2 domain-containing protein. | 0.519 |
ARR3 | OPN1SW | ENSNLEP00000043372 | ENSNLEP00000015079 | Arrestin 3. | Opsin 1, short wave sensitive. | 0.770 |
ARR3 | RBP3 | ENSNLEP00000043372 | ENSNLEP00000018752 | Arrestin 3. | Retinol binding protein 3. | 0.626 |
ARR3 | RHO | ENSNLEP00000043372 | ENSNLEP00000006394 | Arrestin 3. | Rhodopsin. | 0.933 |
CCDC66 | OPN1MW | ENSNLEP00000008832 | ENSNLEP00000016747 | Coiled-coil domain containing 66. | G_PROTEIN_RECEP_F1_2 domain-containing protein. | 0.478 |
CCDC66 | OPN1SW | ENSNLEP00000008832 | ENSNLEP00000015079 | Coiled-coil domain containing 66. | Opsin 1, short wave sensitive. | 0.690 |
GNAT1 | ARR3 | ENSNLEP00000008477 | ENSNLEP00000043372 | G protein subunit alpha transducin 1. | Arrestin 3. | 0.505 |
GNAT1 | GNAT2 | ENSNLEP00000008477 | ENSNLEP00000003647 | G protein subunit alpha transducin 1. | G protein subunit alpha transducin 2. | 0.677 |
GNAT1 | GNGT1 | ENSNLEP00000008477 | ENSNLEP00000018729 | G protein subunit alpha transducin 1. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.758 |
GNAT1 | GNGT2 | ENSNLEP00000008477 | ENSNLEP00000003554 | G protein subunit alpha transducin 1. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.694 |
GNAT1 | OPN1MW | ENSNLEP00000008477 | ENSNLEP00000016747 | G protein subunit alpha transducin 1. | G_PROTEIN_RECEP_F1_2 domain-containing protein. | 0.644 |
GNAT1 | OPN1SW | ENSNLEP00000008477 | ENSNLEP00000015079 | G protein subunit alpha transducin 1. | Opsin 1, short wave sensitive. | 0.713 |
GNAT1 | RBP3 | ENSNLEP00000008477 | ENSNLEP00000018752 | G protein subunit alpha transducin 1. | Retinol binding protein 3. | 0.447 |
GNAT1 | RHO | ENSNLEP00000008477 | ENSNLEP00000006394 | G protein subunit alpha transducin 1. | Rhodopsin. | 0.962 |
GNAT2 | ARR3 | ENSNLEP00000003647 | ENSNLEP00000043372 | G protein subunit alpha transducin 2. | Arrestin 3. | 0.534 |
GNAT2 | GNAT1 | ENSNLEP00000003647 | ENSNLEP00000008477 | G protein subunit alpha transducin 2. | G protein subunit alpha transducin 1. | 0.677 |
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