CLP1 protein (Nomascus leucogenys) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Nomascus leucogenys

NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLP1	CPSF1	ENSNLEP00000015549	ENSNLEP00000012922	Uncharacterized protein.	CPSF_A domain-containing protein.	0.950
CLP1	CPSF2	ENSNLEP00000015549	ENSNLEP00000020817	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.926
CLP1	CPSF3	ENSNLEP00000015549	ENSNLEP00000016256	Uncharacterized protein.	Cleavage and polyadenylation specific factor 3.	0.966
CLP1	CSTF3	ENSNLEP00000015549	ENSNLEP00000029484	Uncharacterized protein.	Cleavage stimulation factor subunit 3.	0.972
CLP1	ENSNLEP00000026709	ENSNLEP00000015549	ENSNLEP00000026709	Uncharacterized protein.	Sen15 domain-containing protein.	0.972
CLP1	FIP1L1	ENSNLEP00000015549	ENSNLEP00000010035	Uncharacterized protein.	Factor interacting with PAPOLA and CPSF1.	0.917
CLP1	G1QK06_NOMLE	ENSNLEP00000015549	ENSNLEP00000001251	Uncharacterized protein.	tRNA_int_end_N2 domain-containing protein.	0.946
CLP1	PCF11	ENSNLEP00000015549	ENSNLEP00000020090	Uncharacterized protein.	PCF11 cleavage and polyadenylation factor subunit.	0.994
CLP1	TSEN2	ENSNLEP00000015549	ENSNLEP00000005688	Uncharacterized protein.	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	0.971
CLP1	TSEN34	ENSNLEP00000015549	ENSNLEP00000035447	Uncharacterized protein.	tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]	0.935
CPSF1	CLP1	ENSNLEP00000012922	ENSNLEP00000015549	CPSF_A domain-containing protein.	Uncharacterized protein.	0.950
CPSF1	CPSF2	ENSNLEP00000012922	ENSNLEP00000020817	CPSF_A domain-containing protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.997
CPSF1	CPSF3	ENSNLEP00000012922	ENSNLEP00000016256	CPSF_A domain-containing protein.	Cleavage and polyadenylation specific factor 3.	0.995
CPSF1	CSTF3	ENSNLEP00000012922	ENSNLEP00000029484	CPSF_A domain-containing protein.	Cleavage stimulation factor subunit 3.	0.973
CPSF1	ENSNLEP00000026709	ENSNLEP00000012922	ENSNLEP00000026709	CPSF_A domain-containing protein.	Sen15 domain-containing protein.	0.527
CPSF1	FIP1L1	ENSNLEP00000012922	ENSNLEP00000010035	CPSF_A domain-containing protein.	Factor interacting with PAPOLA and CPSF1.	0.993
CPSF1	G1QK06_NOMLE	ENSNLEP00000012922	ENSNLEP00000001251	CPSF_A domain-containing protein.	tRNA_int_end_N2 domain-containing protein.	0.612
CPSF1	PCF11	ENSNLEP00000012922	ENSNLEP00000020090	CPSF_A domain-containing protein.	PCF11 cleavage and polyadenylation factor subunit.	0.953
CPSF1	TSEN2	ENSNLEP00000012922	ENSNLEP00000005688	CPSF_A domain-containing protein.	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	0.527
CPSF1	TSEN34	ENSNLEP00000012922	ENSNLEP00000035447	CPSF_A domain-containing protein.	tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]	0.527

page 1 of 4

Server load: low (16%) [HD]

Share

Network

Co-occurrence

Experiments

Co-expression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About