STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTF1APancreas associated transcription factor 1a. (314 aa)    
Predicted Functional Partners:
RBPJL
BTD domain-containing protein.
   
 0.852
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
   
 0.823
FGF10
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
 0.686
PDX1
Pancreatic and duodenal homeobox 1.
   
 
 0.677
GATA6
Uncharacterized protein.
   
 0.638
HNF1A
Uncharacterized protein.
     
 0.618
TCF12
Transcription factor 12.
   
 0.608
NKX6-1
NK6 homeobox 1.
      
 0.581
ISL1
ISL LIM homeobox 1.
   
 0.576
NR5A2
Nuclear receptor subfamily 5 group A member 2.
      
 0.538
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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