STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF170Ring finger protein 170. (212 aa)    
Predicted Functional Partners:
ERLIN2
ER lipid raft associated 2.
    
 
 0.860
ERLIN1
ER lipid raft associated 1.
    
 
 0.787
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 
 0.596
TMUB1
Transmembrane and ubiquitin like domain containing 1.
    
 
 0.553
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
    
 
 0.516
MARCHF6
Membrane associated ring-CH-type finger 6.
   
 
 0.465
RNF139
Ring finger protein 139.
      
 0.457
RNF5
Ring finger protein 5.
      
 0.449
TMEM129
Uncharacterized protein.
      
 0.449
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
    
 
 0.442
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.