STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD23ARAD23 homolog A, nucleotide excision repair protein. (318 aa)    
Predicted Functional Partners:
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
 0.983
ATXN3
Ataxin 3.
    
 0.977
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.957
UBE3A
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
   
 0.953
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.936
ATXN3L
Josephin domain-containing protein.
    
 0.924
NGLY1
N-glycanase 1.
    
 0.895
CETN2
Centrin 2.
   
 0.891
ENSNLEP00000034619
Ubiquitin-like domain-containing protein.
    
 0.865
ENSNLEP00000048393
VWFA domain-containing protein.
   
 0.860
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.