Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTNNB1 | EP300 | ENSNLEP00000006991 | ENSNLEP00000035934 | Catenin beta 1. | E1A binding protein p300. | 0.990 |
CTNNB1 | FOXH1 | ENSNLEP00000006991 | ENSNLEP00000013159 | Catenin beta 1. | Forkhead box H1. | 0.892 |
CTNNB1 | SMAD2 | ENSNLEP00000006991 | ENSNLEP00000023604 | Catenin beta 1. | Mothers against decapentaplegic homolog. | 0.938 |
CTNNB1 | SMAD3 | ENSNLEP00000006991 | ENSNLEP00000041430 | Catenin beta 1. | Mothers against decapentaplegic homolog. | 0.992 |
CTNNB1 | SMAD4 | ENSNLEP00000006991 | ENSNLEP00000014415 | Catenin beta 1. | Mothers against decapentaplegic homolog. | 0.904 |
CTNNB1 | TGFBR1 | ENSNLEP00000006991 | ENSNLEP00000041209 | Catenin beta 1. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. | 0.728 |
CTNNB1 | TGFBR2 | ENSNLEP00000006991 | ENSNLEP00000005036 | Catenin beta 1. | TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] | 0.591 |
E2F4 | EP300 | ENSNLEP00000005266 | ENSNLEP00000035934 | E2F transcription factor 4. | E1A binding protein p300. | 0.663 |
E2F4 | SMAD2 | ENSNLEP00000005266 | ENSNLEP00000023604 | E2F transcription factor 4. | Mothers against decapentaplegic homolog. | 0.972 |
E2F4 | SMAD3 | ENSNLEP00000005266 | ENSNLEP00000041430 | E2F transcription factor 4. | Mothers against decapentaplegic homolog. | 0.989 |
E2F4 | SMAD4 | ENSNLEP00000005266 | ENSNLEP00000014415 | E2F transcription factor 4. | Mothers against decapentaplegic homolog. | 0.989 |
EP300 | CTNNB1 | ENSNLEP00000035934 | ENSNLEP00000006991 | E1A binding protein p300. | Catenin beta 1. | 0.990 |
EP300 | E2F4 | ENSNLEP00000035934 | ENSNLEP00000005266 | E1A binding protein p300. | E2F transcription factor 4. | 0.663 |
EP300 | FOXH1 | ENSNLEP00000035934 | ENSNLEP00000013159 | E1A binding protein p300. | Forkhead box H1. | 0.557 |
EP300 | SMAD2 | ENSNLEP00000035934 | ENSNLEP00000023604 | E1A binding protein p300. | Mothers against decapentaplegic homolog. | 0.935 |
EP300 | SMAD3 | ENSNLEP00000035934 | ENSNLEP00000041430 | E1A binding protein p300. | Mothers against decapentaplegic homolog. | 0.987 |
EP300 | SMAD4 | ENSNLEP00000035934 | ENSNLEP00000014415 | E1A binding protein p300. | Mothers against decapentaplegic homolog. | 0.968 |
EP300 | TGFBR1 | ENSNLEP00000035934 | ENSNLEP00000041209 | E1A binding protein p300. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. | 0.496 |
EP300 | TGFBR2 | ENSNLEP00000035934 | ENSNLEP00000005036 | E1A binding protein p300. | TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] | 0.486 |
FOXH1 | CTNNB1 | ENSNLEP00000013159 | ENSNLEP00000006991 | Forkhead box H1. | Catenin beta 1. | 0.892 |
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