Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGO1 | AGO2 | ENSNLEP00000013638 | ENSNLEP00000001761 | Argonaute RISC component 1; Belongs to the argonaute family. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.997 |
| AGO1 | DICER1 | ENSNLEP00000013638 | ENSNLEP00000021032 | Argonaute RISC component 1; Belongs to the argonaute family. | Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. | 0.997 |
| AGO1 | FMR1 | ENSNLEP00000013638 | ENSNLEP00000016151 | Argonaute RISC component 1; Belongs to the argonaute family. | Fragile X mental retardation 1. | 0.837 |
| AGO1 | FXR1 | ENSNLEP00000013638 | ENSNLEP00000028687 | Argonaute RISC component 1; Belongs to the argonaute family. | FMR1 autosomal homolog 1. | 0.613 |
| AGO1 | FXR2 | ENSNLEP00000013638 | ENSNLEP00000037269 | Argonaute RISC component 1; Belongs to the argonaute family. | FMR1 autosomal homolog 2. | 0.594 |
| AGO2 | AGO1 | ENSNLEP00000001761 | ENSNLEP00000013638 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Argonaute RISC component 1; Belongs to the argonaute family. | 0.997 |
| AGO2 | DICER1 | ENSNLEP00000001761 | ENSNLEP00000021032 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. | 0.998 |
| AGO2 | FMR1 | ENSNLEP00000001761 | ENSNLEP00000016151 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Fragile X mental retardation 1. | 0.877 |
| AGO2 | FXR1 | ENSNLEP00000001761 | ENSNLEP00000028687 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | FMR1 autosomal homolog 1. | 0.877 |
| AGO2 | FXR2 | ENSNLEP00000001761 | ENSNLEP00000037269 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | FMR1 autosomal homolog 2. | 0.777 |
| AGO2 | NUFIP2 | ENSNLEP00000001761 | ENSNLEP00000003996 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Nuclear FMR1 interacting protein 2. | 0.403 |
| CYFIP1 | CYFIP2 | ENSNLEP00000029409 | ENSNLEP00000028974 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | 0.968 |
| CYFIP1 | FMR1 | ENSNLEP00000029409 | ENSNLEP00000016151 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Fragile X mental retardation 1. | 0.993 |
| CYFIP1 | FXR1 | ENSNLEP00000029409 | ENSNLEP00000028687 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | FMR1 autosomal homolog 1. | 0.989 |
| CYFIP1 | FXR2 | ENSNLEP00000029409 | ENSNLEP00000037269 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | FMR1 autosomal homolog 2. | 0.991 |
| CYFIP1 | MAP1B | ENSNLEP00000029409 | ENSNLEP00000038889 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Microtubule associated protein 1B. | 0.539 |
| CYFIP1 | NUFIP2 | ENSNLEP00000029409 | ENSNLEP00000003996 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Nuclear FMR1 interacting protein 2. | 0.652 |
| CYFIP2 | CYFIP1 | ENSNLEP00000028974 | ENSNLEP00000029409 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | 0.968 |
| CYFIP2 | FMR1 | ENSNLEP00000028974 | ENSNLEP00000016151 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Fragile X mental retardation 1. | 0.985 |
| CYFIP2 | FXR1 | ENSNLEP00000028974 | ENSNLEP00000028687 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | FMR1 autosomal homolog 1. | 0.989 |
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