Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHGBChromogranin B. (675 aa)    
Predicted Functional Partners:
CHGA
Chromogranin A.
   
 
 0.988
SCG2
Secretogranin II.
   
  
 0.904
SCG3
Secretogranin III.
   
  
 0.753
SCG5
Secretogranin V.
   
  
 0.673
NPFF
Neuropeptide FF-amide peptide precursor.
      
 0.632
NMB
Uncharacterized protein.
   
 
 0.602
TSHB
Thyroid stimulating hormone subunit beta.
      
 0.601
ABR
ABR activator of RhoGEF and GTPase.
    
 0.551
LRRK1
Leucine rich repeat kinase 1.
    
 0.550
TPH1
Tryptophan hydroxylase 1.
   
  
 0.548
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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