STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD1Chromodomain helicase DNA binding protein 1. (1709 aa)    
Predicted Functional Partners:
H3-4
Histone H3; Belongs to the histone H3 family.
    
 0.962
LOC100593400
Histone H3; Belongs to the histone H3 family.
    
 0.848
H3C13
Histone H3; Belongs to the histone H3 family.
    
 0.848
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.847
LOC100597637
Histone H3; Belongs to the histone H3 family.
    
 0.772
ENSNLEP00000047148
annotation not available
    
 0.772
ENSNLEP00000047693
annotation not available
    
 0.772
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 
 0.711
SSRP1
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
   
 
 0.701
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.699
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.