Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMOT | ARHGAP17 | ENSNLEP00000017787 | ENSNLEP00000029145 | Angiomotin. | Rho GTPase activating protein 17. | 0.993 |
AMOT | CRB3 | ENSNLEP00000017787 | ENSNLEP00000040939 | Angiomotin. | Crumbs cell polarity complex component 3. | 0.481 |
AMOT | LIN7A | ENSNLEP00000017787 | ENSNLEP00000028340 | Angiomotin. | Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. | 0.436 |
AMOT | MPP5 | ENSNLEP00000017787 | ENSNLEP00000000670 | Angiomotin. | Membrane palmitoylated protein 5; Belongs to the MAGUK family. | 0.996 |
AMOT | PATJ | ENSNLEP00000017787 | ENSNLEP00000018128 | Angiomotin. | PATJ crumbs cell polarity complex component. | 0.959 |
ARHGAP17 | AMOT | ENSNLEP00000029145 | ENSNLEP00000017787 | Rho GTPase activating protein 17. | Angiomotin. | 0.993 |
ARHGAP17 | MPP5 | ENSNLEP00000029145 | ENSNLEP00000000670 | Rho GTPase activating protein 17. | Membrane palmitoylated protein 5; Belongs to the MAGUK family. | 0.719 |
ARHGAP17 | PATJ | ENSNLEP00000029145 | ENSNLEP00000018128 | Rho GTPase activating protein 17. | PATJ crumbs cell polarity complex component. | 0.803 |
CLDN1 | MPP5 | ENSNLEP00000008204 | ENSNLEP00000000670 | Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. | Membrane palmitoylated protein 5; Belongs to the MAGUK family. | 0.459 |
CLDN1 | PATJ | ENSNLEP00000008204 | ENSNLEP00000018128 | Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. | PATJ crumbs cell polarity complex component. | 0.766 |
CLDN1 | TJP3 | ENSNLEP00000008204 | ENSNLEP00000003351 | Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. | Tight junction protein 3; Belongs to the MAGUK family. | 0.982 |
CRB1 | CRB3 | ENSNLEP00000021941 | ENSNLEP00000040939 | Crumbs cell polarity complex component 1. | Crumbs cell polarity complex component 3. | 0.578 |
CRB1 | MPP5 | ENSNLEP00000021941 | ENSNLEP00000000670 | Crumbs cell polarity complex component 1. | Membrane palmitoylated protein 5; Belongs to the MAGUK family. | 0.968 |
CRB1 | PATJ | ENSNLEP00000021941 | ENSNLEP00000018128 | Crumbs cell polarity complex component 1. | PATJ crumbs cell polarity complex component. | 0.856 |
CRB3 | AMOT | ENSNLEP00000040939 | ENSNLEP00000017787 | Crumbs cell polarity complex component 3. | Angiomotin. | 0.481 |
CRB3 | CRB1 | ENSNLEP00000040939 | ENSNLEP00000021941 | Crumbs cell polarity complex component 3. | Crumbs cell polarity complex component 1. | 0.578 |
CRB3 | MPP5 | ENSNLEP00000040939 | ENSNLEP00000000670 | Crumbs cell polarity complex component 3. | Membrane palmitoylated protein 5; Belongs to the MAGUK family. | 0.999 |
CRB3 | PATJ | ENSNLEP00000040939 | ENSNLEP00000018128 | Crumbs cell polarity complex component 3. | PATJ crumbs cell polarity complex component. | 0.989 |
KANK4 | PATJ | ENSNLEP00000018140 | ENSNLEP00000018128 | KN motif and ankyrin repeat domains 4. | PATJ crumbs cell polarity complex component. | 0.747 |
LIN7A | AMOT | ENSNLEP00000028340 | ENSNLEP00000017787 | Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. | Angiomotin. | 0.436 |
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