STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KANK4KN motif and ankyrin repeat domains 4. (995 aa)    
Predicted Functional Partners:
PATJ
PATJ crumbs cell polarity complex component.
    
 0.747
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
  0.746
CFDP1
Craniofacial development protein 1; May play a role during embryogenesis.
      
 0.672
TRAPPC3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
   0.633
TRIM28
Tripartite motif containing 28.
    
 0.610
REL
REL proto-oncogene, NF-kB subunit.
   
 0.533
MAP11
Microtubule associated protein 11.
    
   0.467
TRAPPC4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
   0.454
AGBL1
ATP/GTP binding protein like 1.
    
 
 0.448
TRAPPC10
Uncharacterized protein.
    
   0.422
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.