STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTA1Vesicle trafficking 1. (307 aa)    
Predicted Functional Partners:
VPS4A
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.999
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 0.999
IST1
IST1 factor associated with ESCRT-III.
   
 
 0.966
CHMP5
Charged multivesicular body protein 5.
   
 0.948
CHMP1A
Charged multivesicular body protein 1A.
    
 
 0.947
CHMP2A
Charged multivesicular body protein 2A.
    
 0.938
ENSNLEP00000030421
Uncharacterized protein.
   
 0.926
GCH1
GTP cyclohydrolase 1.
   
   0.862
BCAS2
BCAS2 pre-mRNA processing factor.
   
   0.857
CHMP4C
Charged multivesicular body protein 4C.
    
 0.805
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.