STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SF3B3Splicing factor 3b subunit 3. (1210 aa)    
Predicted Functional Partners:
SF3B2
Splicing factor 3b subunit 2.
   
 0.999
PHF5A
Uncharacterized protein.
   
 0.999
SF3B5
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
   
 0.999
SF3B1
Splicing factor 3b subunit 1.
   
 0.999
ENSNLEP00000046159
SF3A2 domain-containing protein.
   
 0.999
SF3B6
RRM domain-containing protein.
    
 0.998
DDX42
DEAD-box helicase 42.
   
 0.998
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 0.993
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.991
SF3A1
Splicing factor 3a subunit 1.
   
 0.990
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.