STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN1Tetraspanin. (241 aa)    
Predicted Functional Partners:
TM4SF5
Transmembrane 4 L six family member 5.
      
 0.605
TM4SF1
Transmembrane 4 L six family member 1.
      
 0.599
CD19
CD19 molecule.
   
 0.566
SLC19A2
Solute carrier family 19 member 2.
    
 
 0.521
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.464
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.447
CMTM1
CKLF like MARVEL transmembrane domain containing 1.
      
 0.446
CDHR1
Cadherin related family member 1.
     
 0.440
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.