STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH1AlkB homolog 1, histone H2A dioxygenase. (334 aa)    
Predicted Functional Partners:
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.866
ALKBH3
AlkB homolog 3, alpha-ketoglutaratedependent dioxygenase.
      
 0.825
ALKBH2
AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
      
 0.807
ALKBH5
AlkB homolog 5, RNA demethylase.
      
 0.793
JMJD4
Jumonji domain containing 4.
   
  
 0.786
ALKBH8
AlkB homolog 8, tRNA methyltransferase.
      
 0.744
ALKBH4
AlkB homolog 4, lysine demethylase.
   
  
 0.742
ALKBH6
AlkB homolog 6.
   
  
 0.740
METTL3
Methyltransferase like 3; Belongs to the MT-A70-like family.
   
  
 0.655
TASOR
Transcription activation suppressor.
   
  
 0.648
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.