STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VCLVinculin. (1091 aa)    
Predicted Functional Partners:
TLN1
Talin 1.
   
 0.999
PXN
Uncharacterized protein.
   
 0.998
LOC100588496
FERM domain-containing protein.
   
 0.992
SORBS3
Sorbin and SH3 domain containing 3.
   
 0.987
SORBS1
Uncharacterized protein.
   
 0.984
RAVER1
Ribonucleoprotein, PTB binding 1.
    
 
 0.971
ACTN1
Actinin alpha 1.
   
 
 0.968
BCAR1
BCAR1 scaffold protein, Cas family member.
    
 0.959
VASP
Vasodilator stimulated phosphoprotein.
    
 
 0.953
ZYX
LIM zinc-binding domain-containing protein.
   
 
 0.953
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.