STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIF1BYip1 interacting factor homolog B, membrane trafficking protein. (318 aa)    
Predicted Functional Partners:
YIPF7
Protein YIPF.
   
 
 0.664
RABAC1
PRA1 family protein.
   
 
 0.639
YIPF5
Protein YIPF.
   
 
 0.638
YIPF4
Protein YIPF.
   
 
 0.612
SELENOS
Uncharacterized protein.
   
 
 0.596
MDC1
Mediator of DNA damage checkpoint 1.
      
 0.570
MAEA
Macrophage erythroblast attacher.
   
 
 0.511
PAH
Phenylalanine hydroxylase.
      
 0.483
DERL1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
 
 0.480
ESYT1
Extended synaptotagmin 1.
    
 
 0.462
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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