STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX6LIM homeobox 6. (352 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.947
SSBP3
Single stranded DNA binding protein 3.
    
   0.751
ENSNLEP00000043257
LisH domain-containing protein.
    
   0.687
SSBP4
LisH domain-containing protein.
    
   0.687
PDE1C
Phosphodiesterase.
      
 0.687
SSBP2
Single stranded DNA binding protein 2.
    
   0.677
LDB2
LIM domain binding 2.
    
 0.656
SST
Somatostatin.
      
 0.651
PVALB
Parvalbumin; Belongs to the parvalbumin family.
    
 
 0.651
RAB2A
RAB2A, member RAS oncogene family.
    
 
 0.643
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.