Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHGAChromogranin A. (460 aa)    
Predicted Functional Partners:
PLEKHB1
Pleckstrin homology domain containing B1.
   
    0.994
CHGB
Chromogranin B.
   
 
 0.988
SCG2
Secretogranin II.
   
 
 0.804
SCG3
Secretogranin III.
   
  
 0.775
SYP
Synaptophysin.
   
  
 0.711
CD79A
CD79a molecule.
      
 0.701
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
      
 0.698
ENO2
Enolase 2.
      
 0.695
OLFM4
Olfactomedin 4.
      
 0.694
TPH1
Tryptophan hydroxylase 1.
   
  
 0.687
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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