Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNT1Cyclin T1; Belongs to the cyclin family. (726 aa)    
Predicted Functional Partners:
AFF4
AF4/FMR2 family member 4.
   
 0.999
CDK9
Cyclin dependent kinase 9.
   
 0.999
CCNT2
Cyclin T2; Belongs to the cyclin family.
    
0.990
HEXIM1
HEXIM P-TEFb complex subunit 1.
    
 
 0.976
LARP7
La ribonucleoprotein domain family member 7.
   
 0.975
BRD4
Bromodomain containing 4.
   
 
 0.974
AFF1
AF4/FMR2 family member 1.
   
 0.946
SUPT5H
Transcription elongation factor SPT5.
   
 0.940
ELL3
Elongation factor for RNA polymerase II 3.
   
 0.913
G1S182_NOMLE
Uncharacterized protein.
   
 0.912
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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