Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDCD11Programmed cell death 11. (1813 aa)    
Predicted Functional Partners:
WDR46
Uncharacterized protein.
   
 0.998
UTP20
UTP20 small subunit processome component.
   
 0.998
NOP14
NOP14 nucleolar protein.
   
 0.997
UTP14A
UTP14A small subunit processome component.
   
 0.997
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.996
DDX52
DExD-box helicase 52.
   
 0.994
HEATR1
HEAT repeat containing 1.
   
 0.994
NOC4L
Nucleolar complex associated 4 homolog.
   
 0.994
UTP4
UTP4 small subunit processome component.
   
 0.992
NOL6
Nucleolar protein 6.
   
 0.991
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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