Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B2M | ENSNLEP00000047262 | ENSNLEP00000037660 | ENSNLEP00000047262 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | Uncharacterized protein. | 0.418 |
B2M | HFE | ENSNLEP00000037660 | ENSNLEP00000025572 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | Homeostatic iron regulator; Belongs to the MHC class I family. | 0.870 |
B2M | LOC100605411 | ENSNLEP00000037660 | ENSNLEP00000030370 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | Uncharacterized protein. | 0.418 |
B2M | TFR2 | ENSNLEP00000037660 | ENSNLEP00000014433 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | Transferrin receptor 2. | 0.552 |
CYBRD1 | ENSNLEP00000047262 | ENSNLEP00000006552 | ENSNLEP00000047262 | Cytochrome b reductase 1. | Uncharacterized protein. | 0.563 |
CYBRD1 | HAMP | ENSNLEP00000006552 | ENSNLEP00000026416 | Cytochrome b reductase 1. | Hepcidin antimicrobial peptide. | 0.711 |
CYBRD1 | HFE | ENSNLEP00000006552 | ENSNLEP00000025572 | Cytochrome b reductase 1. | Homeostatic iron regulator; Belongs to the MHC class I family. | 0.699 |
CYBRD1 | HJV | ENSNLEP00000006552 | ENSNLEP00000007053 | Cytochrome b reductase 1. | Hemojuvelin BMP co-receptor. | 0.598 |
CYBRD1 | LOC100605411 | ENSNLEP00000006552 | ENSNLEP00000030370 | Cytochrome b reductase 1. | Uncharacterized protein. | 0.563 |
CYBRD1 | SLC40A1 | ENSNLEP00000006552 | ENSNLEP00000008032 | Cytochrome b reductase 1. | Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. | 0.723 |
CYBRD1 | TFR2 | ENSNLEP00000006552 | ENSNLEP00000014433 | Cytochrome b reductase 1. | Transferrin receptor 2. | 0.613 |
CYBRD1 | TMPRSS6 | ENSNLEP00000006552 | ENSNLEP00000017925 | Cytochrome b reductase 1. | Transmembrane serine protease 6; Belongs to the peptidase S1 family. | 0.524 |
ENSNLEP00000047262 | B2M | ENSNLEP00000047262 | ENSNLEP00000037660 | Uncharacterized protein. | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | 0.418 |
ENSNLEP00000047262 | CYBRD1 | ENSNLEP00000047262 | ENSNLEP00000006552 | Uncharacterized protein. | Cytochrome b reductase 1. | 0.563 |
ENSNLEP00000047262 | HAMP | ENSNLEP00000047262 | ENSNLEP00000026416 | Uncharacterized protein. | Hepcidin antimicrobial peptide. | 0.623 |
ENSNLEP00000047262 | HFE | ENSNLEP00000047262 | ENSNLEP00000025572 | Uncharacterized protein. | Homeostatic iron regulator; Belongs to the MHC class I family. | 0.983 |
ENSNLEP00000047262 | HJV | ENSNLEP00000047262 | ENSNLEP00000007053 | Uncharacterized protein. | Hemojuvelin BMP co-receptor. | 0.671 |
ENSNLEP00000047262 | SLC40A1 | ENSNLEP00000047262 | ENSNLEP00000008032 | Uncharacterized protein. | Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. | 0.626 |
ENSNLEP00000047262 | TFR2 | ENSNLEP00000047262 | ENSNLEP00000014433 | Uncharacterized protein. | Transferrin receptor 2. | 0.494 |
ENSNLEP00000047262 | TMPRSS6 | ENSNLEP00000047262 | ENSNLEP00000017925 | Uncharacterized protein. | Transmembrane serine protease 6; Belongs to the peptidase S1 family. | 0.590 |
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